Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rfc1P35601 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rfc1P35601 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rfc1P35601 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Rfc1P35601 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.28□□□□□ -0.12
Rfc1P35601 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.28□□□□□ -0.12
Rfc1P35601 Gm15483-201ENSMUST00000120338 456 ntBASIC14.28□□□□□ -0.12
Rfc1P35601 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.28□□□□□ -0.12
Rfc1P35601 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.28□□□□□ -0.12
Rfc1P35601 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rfc1P35601 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.28□□□□□ -0.12
Rfc1P35601 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.28□□□□□ -0.12
Rfc1P35601 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.28□□□□□ -0.12
Rfc1P35601 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.28□□□□□ -0.12
Rfc1P35601 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.28□□□□□ -0.12
Rfc1P35601 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rfc1P35601 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfc1P35601 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.27□□□□□ -0.12
Rfc1P35601 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.27□□□□□ -0.12
Rfc1P35601 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.27□□□□□ -0.12
Rfc1P35601 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.27□□□□□ -0.12
Rfc1P35601 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rfc1P35601 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfc1P35601 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rfc1P35601 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.27□□□□□ -0.13
Rfc1P35601 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.27□□□□□ -0.13
Rfc1P35601 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rfc1P35601 Mir3113-201ENSMUST00000175478 76 ntBASIC14.27□□□□□ -0.13
Rfc1P35601 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.27□□□□□ -0.13
Rfc1P35601 Gm44771-201ENSMUST00000206975 626 ntBASIC14.27□□□□□ -0.13
Rfc1P35601 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.27□□□□□ -0.13
Rfc1P35601 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rfc1P35601 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.27□□□□□ -0.13
Rfc1P35601 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.27□□□□□ -0.13
Rfc1P35601 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc1P35601 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.26□□□□□ -0.13
Rfc1P35601 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rfc1P35601 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rfc1P35601 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.26□□□□□ -0.13
Rfc1P35601 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.26□□□□□ -0.13
Rfc1P35601 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms