Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Mmp13P33435 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Mmp13P33435 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.91□□□□□ -0.18
Mmp13P33435 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Mmp13P33435 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.9□□□□□ -0.18
Mmp13P33435 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.9□□□□□ -0.18
Mmp13P33435 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Mmp13P33435 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Mmp13P33435 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Mmp13P33435 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.9□□□□□ -0.18
Mmp13P33435 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.9□□□□□ -0.18
Mmp13P33435 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.9□□□□□ -0.18
Mmp13P33435 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.9□□□□□ -0.18
Mmp13P33435 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.9□□□□□ -0.18
Mmp13P33435 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Mmp13P33435 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mmp13P33435 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Mmp13P33435 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Mmp13P33435 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Mmp13P33435 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.89□□□□□ -0.19
Mmp13P33435 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.89□□□□□ -0.19
Mmp13P33435 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.89□□□□□ -0.19
Mmp13P33435 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.89□□□□□ -0.19
Mmp13P33435 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Mmp13P33435 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.89□□□□□ -0.19
Mmp13P33435 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.89□□□□□ -0.19
Mmp13P33435 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.89□□□□□ -0.19
Mmp13P33435 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Mmp13P33435 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Mmp13P33435 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.89□□□□□ -0.19
Mmp13P33435 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Mmp13P33435 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Mmp13P33435 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Mir6977-201ENSMUST00000184960 64 ntBASIC13.88□□□□□ -0.19
Mmp13P33435 Gm44719-201ENSMUST00000206404 149 ntBASIC13.88□□□□□ -0.19
Mmp13P33435 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms