Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.68□□□□□ -0.54
Slc6a1P31648 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Slc6a1P31648 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Slc6a1P31648 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Slc6a1P31648 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.68□□□□□ -0.54
Slc6a1P31648 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc6a1P31648 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc6a1P31648 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc6a1P31648 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc6a1P31648 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc6a1P31648 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Slc6a1P31648 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.67□□□□□ -0.54
Slc6a1P31648 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Slc6a1P31648 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.67□□□□□ -0.54
Slc6a1P31648 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Gm15920-201ENSMUST00000118998 402 ntBASIC11.67□□□□□ -0.54
Slc6a1P31648 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.67□□□□□ -0.54
Slc6a1P31648 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.67□□□□□ -0.54
Slc6a1P31648 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Slc6a1P31648 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.67□□□□□ -0.54
Slc6a1P31648 Gm44492-201ENSMUST00000197012 141 ntBASIC11.67□□□□□ -0.54
Slc6a1P31648 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.67□□□□□ -0.54
Slc6a1P31648 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Slc6a1P31648 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Slc6a1P31648 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Slc6a1P31648 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Slc6a1P31648 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Slc6a1P31648 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Slc6a1P31648 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc6a1P31648 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Slc6a1P31648 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Slc6a1P31648 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Slc6a1P31648 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.66□□□□□ -0.54
Slc6a1P31648 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Chchd1-203ENSMUST00000224633 557 ntBASIC11.66□□□□□ -0.54
Slc6a1P31648 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.66□□□□□ -0.54
Slc6a1P31648 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Slc6a1P31648 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.66□□□□□ -0.54
Slc6a1P31648 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.66□□□□□ -0.54
Slc6a1P31648 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Slc6a1P31648 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.66□□□□□ -0.54
Slc6a1P31648 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Slc6a1P31648 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc6a1P31648 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms