Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afxP27661 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afxP27661 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afxP27661 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
H2afxP27661 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H2afxP27661 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afxP27661 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afxP27661 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.13□□□□□ -0.15
H2afxP27661 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
H2afxP27661 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afxP27661 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afxP27661 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
H2afxP27661 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
H2afxP27661 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.13□□□□□ -0.15
H2afxP27661 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afxP27661 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.13□□□□□ -0.15
H2afxP27661 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afxP27661 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afxP27661 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
H2afxP27661 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afxP27661 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
H2afxP27661 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.12□□□□□ -0.15
H2afxP27661 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.12□□□□□ -0.15
H2afxP27661 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
H2afxP27661 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
H2afxP27661 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
H2afxP27661 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
H2afxP27661 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
H2afxP27661 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.12□□□□□ -0.15
H2afxP27661 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
H2afxP27661 Gm27920-201ENSMUST00000183953 96 ntBASIC14.12□□□□□ -0.15
H2afxP27661 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.12□□□□□ -0.15
H2afxP27661 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.12□□□□□ -0.15
H2afxP27661 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.12□□□□□ -0.15
H2afxP27661 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
H2afxP27661 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.12□□□□□ -0.15
H2afxP27661 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afxP27661 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
H2afxP27661 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
H2afxP27661 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Mir874-201ENSMUST00000104769 76 ntBASIC14.11□□□□□ -0.15
H2afxP27661 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
H2afxP27661 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
H2afxP27661 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Gm6443-201ENSMUST00000203599 874 ntBASIC14.11□□□□□ -0.15
H2afxP27661 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.11□□□□□ -0.15
H2afxP27661 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
H2afxP27661 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.11□□□□□ -0.15
H2afxP27661 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.11□□□□□ -0.15
H2afxP27661 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
H2afxP27661 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
H2afxP27661 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afxP27661 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
H2afxP27661 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms