Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cd40lgP27548 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd40lgP27548 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd40lgP27548 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd40lgP27548 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.55□□□□□ -0.4
Cd40lgP27548 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.55□□□□□ -0.4
Cd40lgP27548 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd40lgP27548 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd40lgP27548 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd40lgP27548 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cd40lgP27548 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Cd40lgP27548 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cd40lgP27548 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cd40lgP27548 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.54□□□□□ -0.4
Cd40lgP27548 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.54□□□□□ -0.4
Cd40lgP27548 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Gm8584-201ENSMUST00000171982 758 ntBASIC12.54□□□□□ -0.4
Cd40lgP27548 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.54□□□□□ -0.4
Cd40lgP27548 Gm10766-202ENSMUST00000194123 606 ntBASIC12.54□□□□□ -0.4
Cd40lgP27548 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Gm9797-201ENSMUST00000052902 613 ntBASIC12.54□□□□□ -0.4
Cd40lgP27548 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cd40lgP27548 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.54□□□□□ -0.4
Cd40lgP27548 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cd40lgP27548 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.54□□□□□ -0.4
Cd40lgP27548 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Cd40lgP27548 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd40lgP27548 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Cd40lgP27548 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Gm7488-201ENSMUST00000117148 684 ntBASIC12.53□□□□□ -0.4
Cd40lgP27548 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Cd40lgP27548 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.53□□□□□ -0.4
Cd40lgP27548 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.53□□□□□ -0.4
Cd40lgP27548 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cd40lgP27548 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Gm28760-201ENSMUST00000185995 736 ntBASIC12.53□□□□□ -0.4
Cd40lgP27548 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.53□□□□□ -0.4
Cd40lgP27548 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.53□□□□□ -0.4
Cd40lgP27548 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.53□□□□□ -0.4
Cd40lgP27548 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.53□□□□□ -0.4
Cd40lgP27548 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cd40lgP27548 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cd40lgP27548 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cd40lgP27548 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cd40lgP27548 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.53□□□□□ -0.4
Cd40lgP27548 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd40lgP27548 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cd40lgP27548 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cd40lgP27548 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cd40lgP27548 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cd40lgP27548 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cd40lgP27548 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cd40lgP27548 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cd40lgP27548 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cd40lgP27548 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.52□□□□□ -0.4
Cd40lgP27548 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms