Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm6888-201ENSMUST00000221983 706 ntBASIC12.71□□□□□ -0.37
Clk1P22518 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Clk1P22518 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Clk1P22518 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.71□□□□□ -0.38
Clk1P22518 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Clk1P22518 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clk1P22518 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Clk1P22518 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clk1P22518 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clk1P22518 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clk1P22518 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clk1P22518 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clk1P22518 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Clk1P22518 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clk1P22518 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.7□□□□□ -0.38
Clk1P22518 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Clk1P22518 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.7□□□□□ -0.38
Clk1P22518 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.7□□□□□ -0.38
Clk1P22518 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Gm15393-201ENSMUST00000120499 219 ntBASIC12.7□□□□□ -0.38
Clk1P22518 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.7□□□□□ -0.38
Clk1P22518 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.7□□□□□ -0.38
Clk1P22518 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.7□□□□□ -0.38
Clk1P22518 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.7□□□□□ -0.38
Clk1P22518 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.7□□□□□ -0.38
Clk1P22518 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Clk1P22518 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Clk1P22518 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Clk1P22518 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Clk1P22518 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clk1P22518 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Clk1P22518 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.69□□□□□ -0.38
Clk1P22518 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.69□□□□□ -0.38
Clk1P22518 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Clk1P22518 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Clk1P22518 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Clk1P22518 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.69□□□□□ -0.38
Clk1P22518 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.69□□□□□ -0.38
Clk1P22518 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.69□□□□□ -0.38
Clk1P22518 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.69□□□□□ -0.38
Clk1P22518 Gm17837-201ENSMUST00000186435 985 ntBASIC12.69□□□□□ -0.38
Clk1P22518 Gm21470-201ENSMUST00000187680 696 ntBASIC12.69□□□□□ -0.38
Clk1P22518 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.69□□□□□ -0.38
Clk1P22518 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Clk1P22518 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Clk1P22518 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.69□□□□□ -0.38
Clk1P22518 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Clk1P22518 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms