Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
BdnfP21237 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
BdnfP21237 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.04□□□□□ -0.32
BdnfP21237 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.04□□□□□ -0.32
BdnfP21237 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.04□□□□□ -0.32
BdnfP21237 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
BdnfP21237 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
BdnfP21237 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.03□□□□□ -0.32
BdnfP21237 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
BdnfP21237 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
BdnfP21237 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
BdnfP21237 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.03□□□□□ -0.32
BdnfP21237 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.03□□□□□ -0.32
BdnfP21237 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
BdnfP21237 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.03□□□□□ -0.32
BdnfP21237 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.03□□□□□ -0.32
BdnfP21237 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.03□□□□□ -0.32
BdnfP21237 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.03□□□□□ -0.32
BdnfP21237 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.03□□□□□ -0.32
BdnfP21237 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.03□□□□□ -0.32
BdnfP21237 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
BdnfP21237 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BdnfP21237 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
BdnfP21237 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.03□□□□□ -0.32
BdnfP21237 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.02□□□□□ -0.32
BdnfP21237 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BdnfP21237 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.02□□□□□ -0.33
BdnfP21237 Dupd1-202ENSMUST00000224735 548 ntBASIC13.02□□□□□ -0.33
BdnfP21237 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
BdnfP21237 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
BdnfP21237 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.02□□□□□ -0.33
BdnfP21237 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
BdnfP21237 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BdnfP21237 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.01□□□□□ -0.33
BdnfP21237 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms