Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.5□□□□□ -0.73
Ccl1P10146 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.5□□□□□ -0.73
Ccl1P10146 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.5□□□□□ -0.73
Ccl1P10146 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ccl1P10146 Gm15483-201ENSMUST00000120338 456 ntBASIC10.5□□□□□ -0.73
Ccl1P10146 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.5□□□□□ -0.73
Ccl1P10146 Gm27300-201ENSMUST00000184085 97 ntBASIC10.5□□□□□ -0.73
Ccl1P10146 Gm27335-201ENSMUST00000184758 97 ntBASIC10.5□□□□□ -0.73
Ccl1P10146 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.5□□□□□ -0.73
Ccl1P10146 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.5□□□□□ -0.73
Ccl1P10146 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ccl1P10146 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ccl1P10146 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ccl1P10146 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ccl1P10146 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ccl1P10146 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.49□□□□□ -0.73
Ccl1P10146 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccl1P10146 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ccl1P10146 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Gm15957-201ENSMUST00000118893 974 ntBASIC10.49□□□□□ -0.73
Ccl1P10146 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.49□□□□□ -0.73
Ccl1P10146 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC10.49□□□□□ -0.73
Ccl1P10146 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.49□□□□□ -0.73
Ccl1P10146 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Ccl1P10146 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccl1P10146 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccl1P10146 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccl1P10146 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ccl1P10146 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ccl1P10146 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.49□□□□□ -0.73
Ccl1P10146 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.49□□□□□ -0.73
Ccl1P10146 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ccl1P10146 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl1P10146 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Ccl1P10146 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl1P10146 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl1P10146 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl1P10146 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl1P10146 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.48□□□□□ -0.73
Ccl1P10146 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl1P10146 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl1P10146 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms