Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.84□□□□□ -0.35
ApoeP08226 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ApoeP08226 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ApoeP08226 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.84□□□□□ -0.35
ApoeP08226 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.84□□□□□ -0.35
ApoeP08226 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ApoeP08226 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ApoeP08226 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ApoeP08226 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ApoeP08226 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
ApoeP08226 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ApoeP08226 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.83□□□□□ -0.36
ApoeP08226 Gm15678-201ENSMUST00000117573 960 ntBASIC12.83□□□□□ -0.36
ApoeP08226 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.83□□□□□ -0.36
ApoeP08226 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.83□□□□□ -0.36
ApoeP08226 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Gm9727-201ENSMUST00000161387 555 ntBASIC12.83□□□□□ -0.36
ApoeP08226 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.83□□□□□ -0.36
ApoeP08226 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.83□□□□□ -0.36
ApoeP08226 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.83□□□□□ -0.36
ApoeP08226 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.83□□□□□ -0.36
ApoeP08226 Gm5364-201ENSMUST00000216789 889 ntBASIC12.83□□□□□ -0.36
ApoeP08226 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.83□□□□□ -0.36
ApoeP08226 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ApoeP08226 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.83□□□□□ -0.36
ApoeP08226 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ApoeP08226 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
ApoeP08226 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ApoeP08226 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ApoeP08226 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ApoeP08226 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.82□□□□□ -0.36
ApoeP08226 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ApoeP08226 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ApoeP08226 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ApoeP08226 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ApoeP08226 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ApoeP08226 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.82□□□□□ -0.36
ApoeP08226 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.82□□□□□ -0.36
ApoeP08226 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.82□□□□□ -0.36
ApoeP08226 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.82□□□□□ -0.36
ApoeP08226 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.82□□□□□ -0.36
ApoeP08226 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.82□□□□□ -0.36
ApoeP08226 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.82□□□□□ -0.36
ApoeP08226 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.82□□□□□ -0.36
ApoeP08226 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ApoeP08226 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.82□□□□□ -0.36
ApoeP08226 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.82□□□□□ -0.36
ApoeP08226 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ApoeP08226 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ApoeP08226 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ApoeP08226 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.81□□□□□ -0.36
ApoeP08226 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms