Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col4a2P08122 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.37□□□□□ -0.43
Col4a2P08122 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col4a2P08122 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Col4a2P08122 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Gm25214-201ENSMUST00000104573 129 ntBASIC12.37□□□□□ -0.43
Col4a2P08122 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Mir5132-201ENSMUST00000175166 71 ntBASIC12.37□□□□□ -0.43
Col4a2P08122 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Col4a2P08122 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.37□□□□□ -0.43
Col4a2P08122 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.37□□□□□ -0.43
Col4a2P08122 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.37□□□□□ -0.43
Col4a2P08122 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.36□□□□□ -0.43
Col4a2P08122 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.36□□□□□ -0.43
Col4a2P08122 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.36□□□□□ -0.43
Col4a2P08122 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.36□□□□□ -0.43
Col4a2P08122 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.36□□□□□ -0.43
Col4a2P08122 Gm13665-201ENSMUST00000120830 528 ntBASIC12.36□□□□□ -0.43
Col4a2P08122 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col4a2P08122 Gm22121-201ENSMUST00000175148 54 ntBASIC12.36□□□□□ -0.43
Col4a2P08122 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.36□□□□□ -0.43
Col4a2P08122 Nsd1-205ENSMUST00000224693 852 ntBASIC12.36□□□□□ -0.43
Col4a2P08122 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.36□□□□□ -0.43
Col4a2P08122 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col4a2P08122 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col4a2P08122 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Col4a2P08122 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a2P08122 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.35□□□□□ -0.43
Col4a2P08122 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col4a2P08122 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Col4a2P08122 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.35□□□□□ -0.43
Col4a2P08122 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col4a2P08122 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col4a2P08122 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.35□□□□□ -0.43
Col4a2P08122 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col4a2P08122 Gm38317-201ENSMUST00000195564 343 ntBASIC12.35□□□□□ -0.43
Col4a2P08122 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.35□□□□□ -0.43
Col4a2P08122 Gm43138-201ENSMUST00000199123 708 ntBASIC12.35□□□□□ -0.43
Col4a2P08122 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Col4a2P08122 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col4a2P08122 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Col4a2P08122 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms