Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P06344 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
P06344 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.47
P06344 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.08□□□□□ -0.48
P06344 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.08□□□□□ -0.48
P06344 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.08□□□□□ -0.48
P06344 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
P06344 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.08□□□□□ -0.48
P06344 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
P06344 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.08□□□□□ -0.48
P06344 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.08□□□□□ -0.48
P06344 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.08□□□□□ -0.48
P06344 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
P06344 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
P06344 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
P06344 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06344 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.07□□□□□ -0.48
P06344 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
P06344 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
P06344 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
P06344 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.07□□□□□ -0.48
P06344 Gm15806-201ENSMUST00000120696 955 ntBASIC12.07□□□□□ -0.48
P06344 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
P06344 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.07□□□□□ -0.48
P06344 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.07□□□□□ -0.48
P06344 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.07□□□□□ -0.48
P06344 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
P06344 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
P06344 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
P06344 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.07□□□□□ -0.48
P06344 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.07□□□□□ -0.48
P06344 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
P06344 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06344 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
P06344 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06344 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06344 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
P06344 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06344 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06344 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06344 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06344 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P06344 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06344 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06344 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms