Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.39□□□□□ -0.59
Hoxa3P02831 Gm43094-201ENSMUST00000196549 921 ntBASIC11.39□□□□□ -0.59
Hoxa3P02831 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.39□□□□□ -0.59
Hoxa3P02831 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.39□□□□□ -0.59
Hoxa3P02831 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Hoxa3P02831 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hoxa3P02831 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.38□□□□□ -0.59
Hoxa3P02831 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hoxa3P02831 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hoxa3P02831 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.38□□□□□ -0.59
Hoxa3P02831 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Hoxa3P02831 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Gm14127-201ENSMUST00000117906 678 ntBASIC11.38□□□□□ -0.59
Hoxa3P02831 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.38□□□□□ -0.59
Hoxa3P02831 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.38□□□□□ -0.59
Hoxa3P02831 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hoxa3P02831 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Hoxa3P02831 Gm19078-201ENSMUST00000206311 727 ntBASIC11.38□□□□□ -0.59
Hoxa3P02831 Gm18307-201ENSMUST00000206864 949 ntBASIC11.38□□□□□ -0.59
Hoxa3P02831 Gm5035-201ENSMUST00000215581 927 ntBASIC11.38□□□□□ -0.59
Hoxa3P02831 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.38□□□□□ -0.59
Hoxa3P02831 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.38□□□□□ -0.59
Hoxa3P02831 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hoxa3P02831 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hoxa3P02831 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
Hoxa3P02831 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hoxa3P02831 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxa3P02831 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.38□□□□□ -0.59
Hoxa3P02831 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Hoxa3P02831 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxa3P02831 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hoxa3P02831 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Gm15806-201ENSMUST00000120696 955 ntBASIC11.37□□□□□ -0.59
Hoxa3P02831 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.37□□□□□ -0.59
Hoxa3P02831 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.37□□□□□ -0.59
Hoxa3P02831 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Hoxa3P02831 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Gm43433-201ENSMUST00000196573 481 ntBASIC11.37□□□□□ -0.59
Hoxa3P02831 Gm43438-201ENSMUST00000198133 379 ntBASIC11.37□□□□□ -0.59
Hoxa3P02831 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.37□□□□□ -0.59
Hoxa3P02831 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.37□□□□□ -0.59
Hoxa3P02831 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.37□□□□□ -0.59
Hoxa3P02831 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms