Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.34■□□□□ 0.21
Col4a1P02463 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.34■□□□□ 0.21
Col4a1P02463 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Gm6015-201ENSMUST00000217493 1586 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Col4a1P02463 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Col4a1P02463 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.34■□□□□ 0.21
Col4a1P02463 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Col4a1P02463 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col4a1P02463 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Gm24830-201ENSMUST00000102024 166 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Gm14208-201ENSMUST00000119645 678 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Col4a1P02463 Gm25890-201ENSMUST00000177643 165 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Gm22614-201ENSMUST00000178300 165 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Gm38092-201ENSMUST00000195600 653 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC16.34■□□□□ 0.21
Col4a1P02463 Gm22042-201ENSMUST00000082989 165 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Gm26232-201ENSMUST00000083360 166 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Gm24136-201ENSMUST00000083374 165 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Gm26110-201ENSMUST00000083971 165 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col4a1P02463 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Col4a1P02463 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Col4a1P02463 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col4a1P02463 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col4a1P02463 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
Col4a1P02463 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col4a1P02463 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col4a1P02463 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Col4a1P02463 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a1P02463 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a1P02463 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.33■□□□□ 0.2
Col4a1P02463 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a1P02463 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Col4a1P02463 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a1P02463 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a1P02463 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a1P02463 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a1P02463 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Col4a1P02463 AA914427-201ENSMUST00000193194 1166 ntBASIC16.33■□□□□ 0.2
Col4a1P02463 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a1P02463 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a1P02463 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.33■□□□□ 0.2
Col4a1P02463 CT025533.2-201ENSMUST00000228715 1248 ntBASIC16.33■□□□□ 0.2
Col4a1P02463 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a1P02463 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a1P02463 Gm3287-205ENSMUST00000228893 1332 ntBASIC16.33■□□□□ 0.2
Col4a1P02463 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Col4a1P02463 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a1P02463 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.32■□□□□ 0.2
Col4a1P02463 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 Gm4760-201ENSMUST00000119663 1030 ntBASIC16.32■□□□□ 0.2
Col4a1P02463 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.32■□□□□ 0.2
Col4a1P02463 Gm25043-201ENSMUST00000158604 212 ntBASIC16.32■□□□□ 0.2
Col4a1P02463 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.32■□□□□ 0.2
Col4a1P02463 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.32■□□□□ 0.2
Col4a1P02463 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 Gm4366-201ENSMUST00000201488 1342 ntBASIC16.32■□□□□ 0.2
Col4a1P02463 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.32■□□□□ 0.2
Col4a1P02463 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.32■□□□□ 0.2
Col4a1P02463 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.32■□□□□ 0.2
Col4a1P02463 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a1P02463 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16.31■□□□□ 0.2
Col4a1P02463 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Gm12502-201ENSMUST00000120197 444 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms