Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.42□□□□□ -0.42
P01852 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
P01852 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.42□□□□□ -0.42
P01852 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.42□□□□□ -0.42
P01852 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
P01852 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.42□□□□□ -0.42
P01852 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
P01852 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.41□□□□□ -0.42
P01852 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
P01852 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
P01852 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
P01852 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.41□□□□□ -0.42
P01852 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.41□□□□□ -0.42
P01852 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.41□□□□□ -0.42
P01852 Gm8515-201ENSMUST00000194852 576 ntBASIC12.41□□□□□ -0.42
P01852 Gm18018-201ENSMUST00000198273 408 ntBASIC12.41□□□□□ -0.42
P01852 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
P01852 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
P01852 Gm45668-201ENSMUST00000211271 493 ntBASIC12.41□□□□□ -0.42
P01852 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.41□□□□□ -0.42
P01852 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
P01852 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
P01852 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.41□□□□□ -0.42
P01852 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.41□□□□□ -0.42
P01852 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
P01852 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.41□□□□□ -0.42
P01852 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P01852 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
P01852 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
P01852 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.4□□□□□ -0.42
P01852 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
P01852 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
P01852 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.4□□□□□ -0.42
P01852 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.4□□□□□ -0.42
P01852 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
P01852 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms