Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.52□□□□□ -0.41
Cops4O88544 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.51□□□□□ -0.41
Cops4O88544 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cops4O88544 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cops4O88544 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.51□□□□□ -0.41
Cops4O88544 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cops4O88544 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.51□□□□□ -0.41
Cops4O88544 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.51□□□□□ -0.41
Cops4O88544 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cops4O88544 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cops4O88544 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.51□□□□□ -0.41
Cops4O88544 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cops4O88544 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cops4O88544 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cops4O88544 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.51□□□□□ -0.41
Cops4O88544 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cops4O88544 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cops4O88544 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.5□□□□□ -0.41
Cops4O88544 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Cops4O88544 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cops4O88544 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.5□□□□□ -0.41
Cops4O88544 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.5□□□□□ -0.41
Cops4O88544 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.5□□□□□ -0.41
Cops4O88544 Gm8000-201ENSMUST00000188378 592 ntBASIC12.5□□□□□ -0.41
Cops4O88544 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cops4O88544 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cops4O88544 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.5□□□□□ -0.41
Cops4O88544 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cops4O88544 Gm18057-201ENSMUST00000208220 503 ntBASIC12.5□□□□□ -0.41
Cops4O88544 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.5□□□□□ -0.41
Cops4O88544 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cops4O88544 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cops4O88544 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cops4O88544 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cops4O88544 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.5□□□□□ -0.41
Cops4O88544 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cops4O88544 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms