Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.61□□□□□ -0.39
BckdkO55028 Gm18041-201ENSMUST00000218210 618 ntBASIC12.61□□□□□ -0.39
BckdkO55028 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.61□□□□□ -0.39
BckdkO55028 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.61□□□□□ -0.39
BckdkO55028 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
BckdkO55028 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
BckdkO55028 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.6□□□□□ -0.39
BckdkO55028 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.6□□□□□ -0.39
BckdkO55028 Gm23984-201ENSMUST00000157139 203 ntBASIC12.6□□□□□ -0.39
BckdkO55028 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
BckdkO55028 Gm21470-201ENSMUST00000187680 696 ntBASIC12.6□□□□□ -0.39
BckdkO55028 Gm10766-202ENSMUST00000194123 606 ntBASIC12.6□□□□□ -0.39
BckdkO55028 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.6□□□□□ -0.39
BckdkO55028 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
BckdkO55028 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
BckdkO55028 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.6□□□□□ -0.39
BckdkO55028 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
BckdkO55028 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BckdkO55028 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.59□□□□□ -0.39
BckdkO55028 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.59□□□□□ -0.39
BckdkO55028 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.59□□□□□ -0.39
BckdkO55028 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
BckdkO55028 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.59□□□□□ -0.39
BckdkO55028 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
BckdkO55028 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
BckdkO55028 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.59□□□□□ -0.39
BckdkO55028 Gm12091-201ENSMUST00000146791 830 ntBASIC12.59□□□□□ -0.39
BckdkO55028 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.59□□□□□ -0.39
BckdkO55028 Gm45668-201ENSMUST00000211271 493 ntBASIC12.59□□□□□ -0.39
BckdkO55028 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
BckdkO55028 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
BckdkO55028 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
BckdkO55028 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BckdkO55028 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.59□□□□□ -0.39
BckdkO55028 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
BckdkO55028 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
BckdkO55028 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
BckdkO55028 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.58□□□□□ -0.4
BckdkO55028 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
BckdkO55028 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
BckdkO55028 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
BckdkO55028 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
BckdkO55028 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms