Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn5O54942 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Cldn5O54942 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Gm11425-201ENSMUST00000119608 498 ntBASIC14.05□□□□□ -0.16
Cldn5O54942 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Cldn5O54942 Gm6152-201ENSMUST00000151704 340 ntBASIC14.05□□□□□ -0.16
Cldn5O54942 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.05□□□□□ -0.16
Cldn5O54942 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.05□□□□□ -0.16
Cldn5O54942 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.05□□□□□ -0.16
Cldn5O54942 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldn5O54942 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldn5O54942 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Cldn5O54942 Gm8598-201ENSMUST00000221184 836 ntBASIC14.05□□□□□ -0.16
Cldn5O54942 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldn5O54942 Gm9396-201ENSMUST00000076703 567 ntBASIC14.05□□□□□ -0.16
Cldn5O54942 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn5O54942 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.04□□□□□ -0.16
Cldn5O54942 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Gm11814-201ENSMUST00000119515 929 ntBASIC14.04□□□□□ -0.16
Cldn5O54942 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cldn5O54942 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn5O54942 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cldn5O54942 Gm7561-201ENSMUST00000211203 886 ntBASIC14.04□□□□□ -0.16
Cldn5O54942 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Gm10012-201ENSMUST00000078252 192 ntBASIC14.04□□□□□ -0.16
Cldn5O54942 Gm6091-201ENSMUST00000098307 165 ntBASIC14.04□□□□□ -0.16
Cldn5O54942 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.04□□□□□ -0.16
Cldn5O54942 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cldn5O54942 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn5O54942 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Cldn5O54942 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldn5O54942 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldn5O54942 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Gm27847-201ENSMUST00000183711 107 ntBASIC14.03□□□□□ -0.16
Cldn5O54942 Gm27375-201ENSMUST00000183799 107 ntBASIC14.03□□□□□ -0.16
Cldn5O54942 Mir7085-201ENSMUST00000184353 66 ntBASIC14.03□□□□□ -0.16
Cldn5O54942 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldn5O54942 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldn5O54942 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms