Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.25□□□□□ -0.29
Npc1O35604 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Npc1O35604 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Npc1O35604 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Npc1O35604 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.24□□□□□ -0.29
Npc1O35604 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Gm11478-201ENSMUST00000117851 599 ntBASIC13.24□□□□□ -0.29
Npc1O35604 Gm11918-201ENSMUST00000121660 179 ntBASIC13.24□□□□□ -0.29
Npc1O35604 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.24□□□□□ -0.29
Npc1O35604 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Gm7653-201ENSMUST00000214567 508 ntBASIC13.24□□□□□ -0.29
Npc1O35604 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Npc1O35604 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Npc1O35604 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Npc1O35604 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npc1O35604 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Npc1O35604 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.23□□□□□ -0.29
Npc1O35604 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.23□□□□□ -0.29
Npc1O35604 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Npc1O35604 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.23□□□□□ -0.29
Npc1O35604 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.23□□□□□ -0.29
Npc1O35604 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.23□□□□□ -0.29
Npc1O35604 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.23□□□□□ -0.29
Npc1O35604 Gm43094-201ENSMUST00000196549 921 ntBASIC13.23□□□□□ -0.29
Npc1O35604 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.23□□□□□ -0.29
Npc1O35604 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.23□□□□□ -0.29
Npc1O35604 Gm9908-201ENSMUST00000211534 448 ntBASIC13.23□□□□□ -0.29
Npc1O35604 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.23□□□□□ -0.29
Npc1O35604 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.23□□□□□ -0.29
Npc1O35604 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.23□□□□□ -0.29
Npc1O35604 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Npc1O35604 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Npc1O35604 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Npc1O35604 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms