Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm37917-201ENSMUST00000194711 392 ntBASIC12.77□□□□□ -0.37
Cx3cl1O35188 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.77□□□□□ -0.37
Cx3cl1O35188 Gm44719-201ENSMUST00000206404 149 ntBASIC12.77□□□□□ -0.37
Cx3cl1O35188 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.77□□□□□ -0.37
Cx3cl1O35188 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Matn2-206ENSMUST00000228570 2798 ntBASIC12.77□□□□□ -0.37
Cx3cl1O35188 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Gm43094-201ENSMUST00000196549 921 ntBASIC12.76□□□□□ -0.37
Cx3cl1O35188 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.76□□□□□ -0.37
Cx3cl1O35188 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.76□□□□□ -0.37
Cx3cl1O35188 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.75□□□□□ -0.37
Cx3cl1O35188 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Gm18624-201ENSMUST00000220966 658 ntBASIC12.75□□□□□ -0.37
Cx3cl1O35188 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.75□□□□□ -0.37
Cx3cl1O35188 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Gm15823-201ENSMUST00000064305 670 ntBASIC12.75□□□□□ -0.37
Cx3cl1O35188 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms