Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ebf3O08791 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ebf3O08791 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ebf3O08791 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ebf3O08791 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ebf3O08791 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.09□□□□□ -0.15
Ebf3O08791 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.09□□□□□ -0.15
Ebf3O08791 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.09□□□□□ -0.15
Ebf3O08791 Gm8062-201ENSMUST00000139696 444 ntBASIC14.09□□□□□ -0.15
Ebf3O08791 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ebf3O08791 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.09□□□□□ -0.15
Ebf3O08791 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.09□□□□□ -0.15
Ebf3O08791 Gm38671-201ENSMUST00000200573 130 ntBASIC14.09□□□□□ -0.15
Ebf3O08791 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.09□□□□□ -0.15
Ebf3O08791 Gm6983-201ENSMUST00000214912 628 ntBASIC14.09□□□□□ -0.15
Ebf3O08791 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Ebf3O08791 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.09□□□□□ -0.15
Ebf3O08791 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.09□□□□□ -0.15
Ebf3O08791 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ebf3O08791 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ebf3O08791 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.09□□□□□ -0.15
Ebf3O08791 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.09□□□□□ -0.15
Ebf3O08791 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Ebf3O08791 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf3O08791 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ebf3O08791 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ebf3O08791 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ebf3O08791 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.08□□□□□ -0.16
Ebf3O08791 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ebf3O08791 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Gm13392-201ENSMUST00000117708 150 ntBASIC14.08□□□□□ -0.16
Ebf3O08791 Gm14660-201ENSMUST00000119809 575 ntBASIC14.08□□□□□ -0.16
Ebf3O08791 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.08□□□□□ -0.16
Ebf3O08791 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.08□□□□□ -0.16
Ebf3O08791 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.08□□□□□ -0.16
Ebf3O08791 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Gm27731-201ENSMUST00000185192 107 ntBASIC14.08□□□□□ -0.16
Ebf3O08791 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.08□□□□□ -0.16
Ebf3O08791 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.08□□□□□ -0.16
Ebf3O08791 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.08□□□□□ -0.16
Ebf3O08791 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.08□□□□□ -0.16
Ebf3O08791 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.08□□□□□ -0.16
Ebf3O08791 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf3O08791 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ebf3O08791 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ebf3O08791 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.07□□□□□ -0.16
Ebf3O08791 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms