Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
NpcdF8VQB8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NpcdF8VQB8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NpcdF8VQB8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.27■□□□□ 0.2
NpcdF8VQB8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NpcdF8VQB8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NpcdF8VQB8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NpcdF8VQB8 Gm11964-201ENSMUST00000120982 444 ntBASIC16.27■□□□□ 0.2
NpcdF8VQB8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.27■□□□□ 0.2
NpcdF8VQB8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC16.27■□□□□ 0.2
NpcdF8VQB8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.27■□□□□ 0.2
NpcdF8VQB8 Gm38144-201ENSMUST00000192790 465 ntBASIC16.27■□□□□ 0.2
NpcdF8VQB8 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.27■□□□□ 0.2
NpcdF8VQB8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NpcdF8VQB8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC16.27■□□□□ 0.2
NpcdF8VQB8 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NpcdF8VQB8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NpcdF8VQB8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NpcdF8VQB8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NpcdF8VQB8 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NpcdF8VQB8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NpcdF8VQB8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NpcdF8VQB8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NpcdF8VQB8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NpcdF8VQB8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NpcdF8VQB8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NpcdF8VQB8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.26■□□□□ 0.19
NpcdF8VQB8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 B9d1os-201ENSMUST00000137010 674 ntBASIC16.26■□□□□ 0.19
NpcdF8VQB8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.26■□□□□ 0.19
NpcdF8VQB8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NpcdF8VQB8 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.26■□□□□ 0.19
NpcdF8VQB8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.25■□□□□ 0.19
NpcdF8VQB8 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.25■□□□□ 0.19
NpcdF8VQB8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm11618-201ENSMUST00000117946 267 ntBASIC16.25■□□□□ 0.19
NpcdF8VQB8 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm6222-202ENSMUST00000182143 629 ntBASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm43947-201ENSMUST00000203019 959 ntBASIC16.25■□□□□ 0.19
NpcdF8VQB8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.25■□□□□ 0.19
NpcdF8VQB8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm26315-201ENSMUST00000083890 321 ntBASIC16.25■□□□□ 0.19
NpcdF8VQB8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NpcdF8VQB8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms