Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Gm8598-201ENSMUST00000221184 836 ntBASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb9E9Q5G2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Gm27839-201ENSMUST00000184242 106 ntBASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Gm7561-201ENSMUST00000211203 886 ntBASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhb9E9Q5G2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms