Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Gm13616-201ENSMUST00000120600 222 ntBASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Gm22175-201ENSMUST00000175007 78 ntBASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Gm44608-201ENSMUST00000206827 855 ntBASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Gm24543-201ENSMUST00000103867 82 ntBASIC13.62□□□□□ -0.23
Gm28043E0CXC2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Gm27622-201ENSMUST00000183779 60 ntBASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Gm16476-201ENSMUST00000221544 139 ntBASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.62□□□□□ -0.23
Gm28043E0CXC2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Gm8410-201ENSMUST00000117225 605 ntBASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Dupd1-202ENSMUST00000224735 548 ntBASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Mir125a-201ENSMUST00000083545 68 ntBASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm28043E0CXC2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms