Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Gm14350-201ENSMUST00000116642 640 ntBASIC11.43□□□□□ -0.58
Col6a4A2AX52 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Gm24447-201ENSMUST00000083977 338 ntBASIC11.43□□□□□ -0.58
Col6a4A2AX52 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.43□□□□□ -0.58
Col6a4A2AX52 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.43□□□□□ -0.58
Col6a4A2AX52 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Gm17376-201ENSMUST00000166016 84 ntBASIC11.43□□□□□ -0.58
Col6a4A2AX52 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.43□□□□□ -0.58
Col6a4A2AX52 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a4A2AX52 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.42□□□□□ -0.58
Col6a4A2AX52 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Gm14381-201ENSMUST00000122105 414 ntBASIC11.42□□□□□ -0.58
Col6a4A2AX52 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.42□□□□□ -0.58
Col6a4A2AX52 Rps4l-202ENSMUST00000204242 789 ntBASIC11.42□□□□□ -0.58
Col6a4A2AX52 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.42□□□□□ -0.58
Col6a4A2AX52 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.42□□□□□ -0.58
Col6a4A2AX52 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Gm15370-201ENSMUST00000117158 253 ntBASIC11.42□□□□□ -0.58
Col6a4A2AX52 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Col6a4A2AX52 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.42□□□□□ -0.58
Col6a4A2AX52 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a4A2AX52 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Gm22902-201ENSMUST00000158488 302 ntBASIC11.41□□□□□ -0.58
Col6a4A2AX52 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms