Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Mir1982-201ENSMUST00000157368 74 ntBASIC14.13□□□□□ -0.15
Scn1aA2APX8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.13□□□□□ -0.15
Scn1aA2APX8 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.13□□□□□ -0.15
Scn1aA2APX8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.13□□□□□ -0.15
Scn1aA2APX8 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.13□□□□□ -0.15
Scn1aA2APX8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1aA2APX8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.13□□□□□ -0.15
Scn1aA2APX8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.13□□□□□ -0.15
Scn1aA2APX8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Scn1aA2APX8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.12□□□□□ -0.15
Scn1aA2APX8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Gm37424-201ENSMUST00000191727 561 ntBASIC14.12□□□□□ -0.15
Scn1aA2APX8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Scn1aA2APX8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.12□□□□□ -0.15
Scn1aA2APX8 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.12□□□□□ -0.15
Scn1aA2APX8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.12□□□□□ -0.15
Scn1aA2APX8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn1aA2APX8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Gm16177-201ENSMUST00000120728 718 ntBASIC14.12□□□□□ -0.15
Scn1aA2APX8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.12□□□□□ -0.15
Scn1aA2APX8 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.12□□□□□ -0.15
Scn1aA2APX8 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.12□□□□□ -0.15
Scn1aA2APX8 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.12□□□□□ -0.15
Scn1aA2APX8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1aA2APX8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Mir686-201ENSMUST00000102174 109 ntBASIC14.11□□□□□ -0.15
Scn1aA2APX8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Gm8062-201ENSMUST00000139696 444 ntBASIC14.11□□□□□ -0.15
Scn1aA2APX8 Gm45784-201ENSMUST00000188360 142 ntBASIC14.11□□□□□ -0.15
Scn1aA2APX8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.11□□□□□ -0.15
Scn1aA2APX8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.11□□□□□ -0.15
Scn1aA2APX8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.11□□□□□ -0.15
Scn1aA2APX8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms