Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd2l1A2A259 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Gm6912-201ENSMUST00000117218 544 ntBASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Gm12091-201ENSMUST00000146791 830 ntBASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Gm21854-201ENSMUST00000179901 471 ntBASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Gm45668-201ENSMUST00000211271 493 ntBASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Gm9797-201ENSMUST00000052902 613 ntBASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Gm15823-201ENSMUST00000064305 670 ntBASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd2l1A2A259 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Gm12138-201ENSMUST00000122180 951 ntBASIC13.29□□□□□ -0.28
Pkd2l1A2A259 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Gm28760-201ENSMUST00000185995 736 ntBASIC13.29□□□□□ -0.28
Pkd2l1A2A259 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms