Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Gm7287-201ENSMUST00000205267 602 ntBASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Gm8463-201ENSMUST00000208573 613 ntBASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Gm12928-201ENSMUST00000117115 573 ntBASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Snora78-201ENSMUST00000158630 128 ntBASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Gm45331-201ENSMUST00000209868 554 ntBASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap99A0A140LIX9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Cfap99A0A140LIX9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cfap99A0A140LIX9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cfap99A0A140LIX9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cfap99A0A140LIX9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cfap99A0A140LIX9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Gm27847-201ENSMUST00000183711 107 ntBASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Gm27375-201ENSMUST00000183799 107 ntBASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.2■□□□□ 0.18
Cfap99A0A140LIX9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap99A0A140LIX9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms