Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm18889-201ENSMUST00000174284 929 ntBASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm27920-201ENSMUST00000183953 96 ntBASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm43575-201ENSMUST00000196420 516 ntBASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm20553-201ENSMUST00000204205 844 ntBASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm2810-201ENSMUST00000118681 990 ntBASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm5867-201ENSMUST00000063197 592 ntBASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav6n-6A0A075B6B2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms