Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Mir698-201ENSMUST00000102164 109 ntBASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm45453-201ENSMUST00000211758 853 ntBASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm11025-201ENSMUST00000140773 466 ntBASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm20553-201ENSMUST00000204205 844 ntBASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Mir125a-201ENSMUST00000083545 68 ntBASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cx3cr1Q9Z0D9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.47□□□□□ -0.57
Cx3cr1Q9Z0D9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms