Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six6Q9QZ28 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six6Q9QZ28 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Six6Q9QZ28 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six6Q9QZ28 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six6Q9QZ28 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six6Q9QZ28 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.48□□□□□ -0.57
Six6Q9QZ28 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Six6Q9QZ28 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Six6Q9QZ28 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six6Q9QZ28 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six6Q9QZ28 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.48□□□□□ -0.57
Six6Q9QZ28 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.47□□□□□ -0.57
Six6Q9QZ28 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.47□□□□□ -0.57
Six6Q9QZ28 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.47□□□□□ -0.57
Six6Q9QZ28 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.47□□□□□ -0.57
Six6Q9QZ28 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.47□□□□□ -0.57
Six6Q9QZ28 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.47□□□□□ -0.57
Six6Q9QZ28 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six6Q9QZ28 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.46□□□□□ -0.57
Six6Q9QZ28 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.46□□□□□ -0.57
Six6Q9QZ28 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.46□□□□□ -0.57
Six6Q9QZ28 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Gm10231-201ENSMUST00000181584 441 ntBASIC11.46□□□□□ -0.57
Six6Q9QZ28 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.46□□□□□ -0.57
Six6Q9QZ28 Gm10175-202ENSMUST00000208752 441 ntBASIC11.46□□□□□ -0.57
Six6Q9QZ28 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.46□□□□□ -0.57
Six6Q9QZ28 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Six6Q9QZ28 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six6Q9QZ28 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six6Q9QZ28 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.46□□□□□ -0.58
Six6Q9QZ28 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Six6Q9QZ28 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six6Q9QZ28 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms