Protein–RNA interactions for Protein: Q9JM96

Cdc42ep4, Cdc42 effector protein 4, mousemouse

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep4Q9JM96 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Gm27731-201ENSMUST00000185192 107 ntBASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc42ep4Q9JM96 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Gm4804-201ENSMUST00000182234 999 ntBASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdc42ep4Q9JM96 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Gm11814-201ENSMUST00000119515 929 ntBASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Gm8652-201ENSMUST00000181363 964 ntBASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Gm43179-201ENSMUST00000198797 275 ntBASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Gm7561-201ENSMUST00000211203 886 ntBASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdc42ep4Q9JM96 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdc42ep4Q9JM96 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.87□□□□□ -0.03
Cdc42ep4Q9JM96 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms