Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Gm11478-201ENSMUST00000117851 599 ntBASIC12.74□□□□□ -0.37
Rtp4Q9ER80 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rtp4Q9ER80 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Gm11918-201ENSMUST00000121660 179 ntBASIC12.73□□□□□ -0.37
Rtp4Q9ER80 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Gm5354-201ENSMUST00000182417 973 ntBASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rtp4Q9ER80 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms