Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Gm14726-201ENSMUST00000120623 896 ntBASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Gm12363-201ENSMUST00000122250 668 ntBASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Gm18584-201ENSMUST00000203098 964 ntBASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-4Q9EQM3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Gm12217-201ENSMUST00000118858 696 ntBASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Gm5523-201ENSMUST00000180415 997 ntBASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Mir6927-201ENSMUST00000184494 71 ntBASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Gm31256-201ENSMUST00000194705 506 ntBASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-4Q9EQM3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Gm10434-201ENSMUST00000101158 471 ntBASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms