Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Gm5279-201ENSMUST00000199575 745 ntBASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Gm37917-201ENSMUST00000194711 392 ntBASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2aQ9DB34 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2aQ9DB34 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms