Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Gm11543-201ENSMUST00000120758 370 ntBASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Gm7461-201ENSMUST00000058918 827 ntBASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim42Q9D2H5 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.59□□□□□ -0.23
Trim42Q9D2H5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Gm18195-201ENSMUST00000207604 706 ntBASIC13.59□□□□□ -0.23
Trim42Q9D2H5 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim42Q9D2H5 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trim42Q9D2H5 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim42Q9D2H5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim42Q9D2H5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trim42Q9D2H5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Gm9385-201ENSMUST00000117563 472 ntBASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.58□□□□□ -0.24
Trim42Q9D2H5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim42Q9D2H5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms