Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Gm11524-201ENSMUST00000119349 807 ntBASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ssbp3Q9D032 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ssbp3Q9D032 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ssbp3Q9D032 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ssbp3Q9D032 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Gm12138-201ENSMUST00000122180 951 ntBASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Gm2445-201ENSMUST00000182798 989 ntBASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Mir7654-201ENSMUST00000185082 70 ntBASIC11.33□□□□□ -0.6
Ssbp3Q9D032 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Gm43094-201ENSMUST00000196549 921 ntBASIC11.33□□□□□ -0.6
Ssbp3Q9D032 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Gm19078-201ENSMUST00000206311 727 ntBASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.33□□□□□ -0.6
Ssbp3Q9D032 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Gm27701-201ENSMUST00000184498 110 ntBASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ssbp3Q9D032 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms