Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Syt7-205ENSMUST00000224135 1557 ntBASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Gm6218-201ENSMUST00000219812 628 ntBASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rpa3Q9CQ71 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa3Q9CQ71 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Gm5354-201ENSMUST00000182417 973 ntBASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa3Q9CQ71 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa3Q9CQ71 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.34□□□□□ -0.11
Rpa3Q9CQ71 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa3Q9CQ71 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.34□□□□□ -0.11
Rpa3Q9CQ71 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms