Protein–RNA interactions for Protein: Q9CQ48

Nudcd2, NudC domain-containing protein 2, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd2Q9CQ48 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nudcd2Q9CQ48 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nudcd2Q9CQ48 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nudcd2Q9CQ48 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nudcd2Q9CQ48 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nudcd2Q9CQ48 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nudcd2Q9CQ48 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nudcd2Q9CQ48 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nudcd2Q9CQ48 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nudcd2Q9CQ48 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Nudcd2Q9CQ48 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nudcd2Q9CQ48 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Gm37714-201ENSMUST00000194742 342 ntBASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Gm44719-201ENSMUST00000206404 149 ntBASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nudcd2Q9CQ48 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nudcd2Q9CQ48 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nudcd2Q9CQ48 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Nudcd2Q9CQ48 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Nudcd2Q9CQ48 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nudcd2Q9CQ48 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Nudcd2Q9CQ48 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nudcd2Q9CQ48 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nudcd2Q9CQ48 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.65□□□□□ -0.55
Nudcd2Q9CQ48 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nudcd2Q9CQ48 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Gm9727-201ENSMUST00000161387 555 ntBASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Gm38225-201ENSMUST00000194001 393 ntBASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nudcd2Q9CQ48 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms