Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Gm13823-201ENSMUST00000119930 345 ntBASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.24□□□□□ -0.45
Krt88Q9CPR6 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Krt88Q9CPR6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Gm15427-201ENSMUST00000117288 531 ntBASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms