Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Gm15321-201ENSMUST00000121290 288 ntBASIC13.53□□□□□ -0.24
Trim33Q99PP7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim33Q99PP7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.53□□□□□ -0.24
Trim33Q99PP7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim33Q99PP7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim33Q99PP7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trim33Q99PP7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.52□□□□□ -0.25
Trim33Q99PP7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.52□□□□□ -0.25
Trim33Q99PP7 Gm7430-201ENSMUST00000193824 1144 ntBASIC13.52□□□□□ -0.25
Trim33Q99PP7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim33Q99PP7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim33Q99PP7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Gm13385-201ENSMUST00000121089 220 ntBASIC13.51□□□□□ -0.25
Trim33Q99PP7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.51□□□□□ -0.25
Trim33Q99PP7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms