Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Gm43118-201ENSMUST00000199149 775 ntBASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Gm43822-201ENSMUST00000200285 476 ntBASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim34aQ99PP6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Gm7029-201ENSMUST00000173226 450 ntBASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Gm25927-201ENSMUST00000175058 117 ntBASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Gm27516-201ENSMUST00000184237 98 ntBASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Mir8109-201ENSMUST00000184375 117 ntBASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.68■□□□□ 0.26
Trim34aQ99PP6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Gm13123-201ENSMUST00000122173 492 ntBASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Gm43133-201ENSMUST00000197472 463 ntBASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Gm45930-201ENSMUST00000221330 292 ntBASIC16.67■□□□□ 0.26
Trim34aQ99PP6 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim34aQ99PP6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim34aQ99PP6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim34aQ99PP6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim34aQ99PP6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim34aQ99PP6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim34aQ99PP6 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim34aQ99PP6 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.66■□□□□ 0.26
Trim34aQ99PP6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.66■□□□□ 0.26
Trim34aQ99PP6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms