Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2a1Q99PM3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Gm10499-201ENSMUST00000174094 934 ntBASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC14.85□□□□□ -0.03
Gtf2a1Q99PM3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.84□□□□□ -0.03
Gtf2a1Q99PM3 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gtf2a1Q99PM3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gtf2a1Q99PM3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gtf2a1Q99PM3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Gtf2a1Q99PM3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms