Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Gm14660-201ENSMUST00000119809 575 ntBASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Gm24644-201ENSMUST00000157114 139 ntBASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Gm27731-201ENSMUST00000185192 107 ntBASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b1Q99NB9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Gm38144-201ENSMUST00000192790 465 ntBASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Gm8598-201ENSMUST00000221184 836 ntBASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b1Q99NB9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sf3b1Q99NB9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b1Q99NB9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b1Q99NB9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.37□□□□□ -0.11
Sf3b1Q99NB9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b1Q99NB9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sf3b1Q99NB9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b1Q99NB9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms