Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Gm17837-201ENSMUST00000186435 985 ntBASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Gm46209-201ENSMUST00000217912 553 ntBASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Gm6888-201ENSMUST00000221983 706 ntBASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf111Q99ML9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Gm15920-201ENSMUST00000118998 402 ntBASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Gm15653-201ENSMUST00000119247 907 ntBASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Mir6956-201ENSMUST00000183598 62 ntBASIC13.18□□□□□ -0.3
Rnf111Q99ML9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf111Q99ML9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms