Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Gm5370-201ENSMUST00000187187 574 ntBASIC11.92□□□□□ -0.5
Scrt1Q99M85 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.92□□□□□ -0.5
Scrt1Q99M85 Gm19078-201ENSMUST00000206311 727 ntBASIC11.92□□□□□ -0.5
Scrt1Q99M85 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Gm18054-201ENSMUST00000207539 555 ntBASIC11.92□□□□□ -0.5
Scrt1Q99M85 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Gm45880-201ENSMUST00000213041 853 ntBASIC11.92□□□□□ -0.5
Scrt1Q99M85 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Gm14723-201ENSMUST00000118686 215 ntBASIC11.91□□□□□ -0.5
Scrt1Q99M85 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.91□□□□□ -0.5
Scrt1Q99M85 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Gm10012-201ENSMUST00000078252 192 ntBASIC11.91□□□□□ -0.5
Scrt1Q99M85 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.91□□□□□ -0.5
Scrt1Q99M85 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gm15957-201ENSMUST00000118893 974 ntBASIC11.9□□□□□ -0.5
Scrt1Q99M85 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gm38671-201ENSMUST00000200573 130 ntBASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gm18905-201ENSMUST00000205454 928 ntBASIC11.9□□□□□ -0.5
Scrt1Q99M85 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms