Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Gm13385-201ENSMUST00000121089 220 ntBASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Gm5312-201ENSMUST00000203728 547 ntBASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdk5rap3Q99LM2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdk5rap3Q99LM2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Cdk5rap3Q99LM2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Gm46209-201ENSMUST00000217912 553 ntBASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap3Q99LM2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms