Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lims1Q99JW4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lims1Q99JW4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lims1Q99JW4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lims1Q99JW4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lims1Q99JW4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.41□□□□□ -0.42
Lims1Q99JW4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lims1Q99JW4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lims1Q99JW4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.4□□□□□ -0.42
Lims1Q99JW4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.4□□□□□ -0.42
Lims1Q99JW4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Gm27533-201ENSMUST00000183800 152 ntBASIC12.4□□□□□ -0.42
Lims1Q99JW4 Gm10766-202ENSMUST00000194123 606 ntBASIC12.4□□□□□ -0.42
Lims1Q99JW4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lims1Q99JW4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lims1Q99JW4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.39□□□□□ -0.43
Lims1Q99JW4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.39□□□□□ -0.43
Lims1Q99JW4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.39□□□□□ -0.43
Lims1Q99JW4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.39□□□□□ -0.43
Lims1Q99JW4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Mir449b-201ENSMUST00000104833 80 ntBASIC12.39□□□□□ -0.43
Lims1Q99JW4 Gm6912-201ENSMUST00000117218 544 ntBASIC12.39□□□□□ -0.43
Lims1Q99JW4 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.39□□□□□ -0.43
Lims1Q99JW4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Gm24420-201ENSMUST00000176676 59 ntBASIC12.39□□□□□ -0.43
Lims1Q99JW4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Gm4804-201ENSMUST00000182234 999 ntBASIC12.39□□□□□ -0.43
Lims1Q99JW4 Gm7774-201ENSMUST00000200064 533 ntBASIC12.39□□□□□ -0.43
Lims1Q99JW4 Gm9229-201ENSMUST00000222777 126 ntBASIC12.39□□□□□ -0.43
Lims1Q99JW4 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.39□□□□□ -0.43
Lims1Q99JW4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lims1Q99JW4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.38□□□□□ -0.43
Lims1Q99JW4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lims1Q99JW4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.38□□□□□ -0.43
Lims1Q99JW4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.38□□□□□ -0.43
Lims1Q99JW4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms