Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm27397-201ENSMUST00000184997 107 ntBASIC13.69□□□□□ -0.22
Cdk9Q99J95 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.68□□□□□ -0.22
Cdk9Q99J95 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.68□□□□□ -0.22
Cdk9Q99J95 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Gm2445-201ENSMUST00000182798 989 ntBASIC13.68□□□□□ -0.22
Cdk9Q99J95 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.68□□□□□ -0.22
Cdk9Q99J95 Gm44492-201ENSMUST00000197012 141 ntBASIC13.68□□□□□ -0.22
Cdk9Q99J95 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.68□□□□□ -0.22
Cdk9Q99J95 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.68□□□□□ -0.22
Cdk9Q99J95 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cdk9Q99J95 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.68□□□□□ -0.22
Cdk9Q99J95 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk9Q99J95 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.67□□□□□ -0.22
Cdk9Q99J95 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Gm15957-201ENSMUST00000118893 974 ntBASIC13.67□□□□□ -0.22
Cdk9Q99J95 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.67□□□□□ -0.22
Cdk9Q99J95 Gm11543-201ENSMUST00000120758 370 ntBASIC13.67□□□□□ -0.22
Cdk9Q99J95 Gm14822-201ENSMUST00000122247 291 ntBASIC13.67□□□□□ -0.22
Cdk9Q99J95 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdk9Q99J95 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.67□□□□□ -0.22
Cdk9Q99J95 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.67□□□□□ -0.22
Cdk9Q99J95 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.67□□□□□ -0.22
Cdk9Q99J95 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdk9Q99J95 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cdk9Q99J95 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms