Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Gm16476-201ENSMUST00000221544 139 ntBASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhac1Q91Y10 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Gm15653-201ENSMUST00000119247 907 ntBASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Dupd1-202ENSMUST00000224735 548 ntBASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Mir125a-201ENSMUST00000083545 68 ntBASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhac1Q91Y10 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdhac1Q91Y10 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhac1Q91Y10 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhac1Q91Y10 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhac1Q91Y10 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhac1Q91Y10 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms