Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Gm6447-201ENSMUST00000118905 835 ntBASIC15.5■□□□□ 0.07
Trex1Q91XB0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.5■□□□□ 0.07
Trex1Q91XB0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.5■□□□□ 0.07
Trex1Q91XB0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trex1Q91XB0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.5■□□□□ 0.07
Trex1Q91XB0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.5■□□□□ 0.07
Trex1Q91XB0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Mir8109-201ENSMUST00000184375 117 ntBASIC15.49■□□□□ 0.07
Trex1Q91XB0 Gm43118-201ENSMUST00000199149 775 ntBASIC15.49■□□□□ 0.07
Trex1Q91XB0 Gm44069-201ENSMUST00000204898 506 ntBASIC15.49■□□□□ 0.07
Trex1Q91XB0 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.49■□□□□ 0.07
Trex1Q91XB0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.49■□□□□ 0.07
Trex1Q91XB0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trex1Q91XB0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.48■□□□□ 0.07
Trex1Q91XB0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Gm45930-201ENSMUST00000221330 292 ntBASIC15.48■□□□□ 0.07
Trex1Q91XB0 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.48■□□□□ 0.07
Trex1Q91XB0 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.48■□□□□ 0.07
Trex1Q91XB0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.48■□□□□ 0.07
Trex1Q91XB0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.48■□□□□ 0.07
Trex1Q91XB0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.48■□□□□ 0.07
Trex1Q91XB0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms